get_alignment_table#
- biotite.application_v2.mmseqs.get_alignment_table(app: T, alignment_db: AlignmentDatabase[T], columns: list[str]) dict[str, list[str]][source]#
Export selected alignment columns.
- Parameters:
- appMMseqsApp or FoldseekApp
The application to use.
- alignment_dbAlignmentDatabase
The alignment database to read.
- columnslist of str
The
convertalis --format-outputcolumns to include.
- Returns:
- tabledict of str to list of str
Columns mapped to their raw string values.
