Extensions#

This page shows Biotite’s extension packages: These are packages that build upon Biotite’s functionality, but are separate Python packages that are developed independently.

Gecos

An automatic generator for alignment color schemes based on substitution matrices

https://gecos.biotite-python.org/
Hydride

Prediction of hydrogen positions in arbitrary molecular models

https://hydride.biotite-python.org/
fastpdb

A high performance drop-in replacement for Biotite’s PDBFile

https://github.com/biotite-dev/fastpdb
Springcraft

Investigation of molecular dynamics using elastic network models

https://springcraft.biotite-python.org/
pepp’r

Evaluation of predicted poses against reference structures

https://peppr.vant.ai/