biotite.application.viennarna
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A subpackage that provides interfaces to the ViennaRNA software package.
Secondary structures can be predicted using RNAfold and plotted using RNAplot.
Content#
Predict the consensus secondary structure from a ribonucleic acid alignment using ViennaRNA's RNAalifold software. |
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Compute the minimum free energy secondary structure of a ribonucleic acid sequence using ViennaRNA's RNAfold software. |
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Get coordinates for a 2D representation of any unknotted RNA structure using ViennaRNA's RNAplot. |