get_sequence#
- biotite.sequence.io.genbank.get_sequence(gb_file: GenBankFile, format: Literal['gb', 'gp'] = 'gb') NucleotideSequence | ProteinSequence[source]#
Get the sequence from the ORIGIN field of a GenBank file.
- Parameters:
- gb_fileGenBankFile
The GenBank file to read the ORIGIN field from.
- format{‘gb’, ‘gp’}
Indicates whether the file is a GenBank or a GenPept file. Depending on this parameter a
NucleotideSequenceor aProteinSequenceis returned.
- Returns:
- sequenceNucleotideSequence or ProteinSequence
The reference sequence in the file.
