ion_names

biotite.structure.info.ion_names() → list[str]

Get a list of all residues in the PDB Chemical Component Dictionary (CCD) that are monoatomic ions. [1]

Returns:

ion_nameslist of str

A list of codes containing residues that are monoatomic ions.

References

[1]

J. D. Westbrook, C. Shao, Z. Feng, M. Zhuravleva, S. Velankar, J. Young, “The chemical component dictionary: complete descriptions of constituent molecules in experimentally determined 3D macromolecules in the Protein Data Bank,” Bioinformatics, vol. 31, pp. 1274–1278, April 2015. doi: 10.1093/bioinformatics/btu789