set_sequence#
- biotite.sequence.io.fastq.set_sequence(fastq_file: FastqFile, sequence: NucleotideSequence, scores: ndarray[tuple[K], dtype[integer]], header: str | None = None, as_rna: bool = False) None[source]#
Set a sequence and a quality score array in a FastqFile instance.
- Parameters:
- fastq_fileFastqFile
The FastqFile to be accessed.
- sequenceNucleotideSequence
The sequence to be set.
- scoresndarray, dtype=int
The quality scores to be set.
- headerstr, optional
The identifier for the sequence. Default is ‘sequence’.
- as_rnabool, optional
If set to true, the sequence symbol
'T'will be replaced by'U'.