from_template

biotite.structure.from_template(template: AtomArray[N] | AtomArrayStack[Any, N], coord: ndarray[tuple[M, N, XYZ], dtype[floating]], box: ndarray[tuple[M, XYZ, XYZ], dtype[floating]] | None = None) → AtomArrayStack[M, N]

Create an AtomArrayStack using template atoms and given coordinates.

Parameters:

templateAtomArray, shape=(n,) or AtomArrayStack, shape=(m,n)

The annotation arrays and bonds of the returned stack are taken from this template.

coordndarray, dtype=float, shape=(l,n,3)

The coordinates for each model of the returned stack.

boxndarray, optional, dtype=float, shape=(l,3,3)

The box for each model of the returned stack.

Returns:

array_stackAtomArrayStack

A stack containing the annotation arrays and bonds from template but the coordinates from coord and the boxes from boxes.

Gallery

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Creation of an amino acid rotamer library

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