biotite.sequence.io.fastq.set_sequence¶
- biotite.sequence.io.fastq.set_sequence(fastq_file, sequence, scores, header=None, as_rna=False)[source]¶
Set a sequence and a quality score array in a FastqFile instance.
- Parameters
- fastq_fileFastqFile
The FastqFile to be accessed.
- sequenceNucleotideSequence
The sequence to be set.
- scoresndarray, dtype=int
The quality scores to be set.
- headerstr, optional
The identifier for the sequence. Default is ‘sequence’.
- as_rnabool, optional
If set to true, the sequence symbol
'T'will be replaced by'U'.
