biotite.sequence.io.fasta.set_sequence

biotite.sequence.io.fasta.set_sequence(fasta_file, sequence, header=None, as_rna=False)[source]

Set a sequence in a FastaFile instance.

Parameters
fasta_fileFastaFile

The FastaFile to be accessed.

sequenceSequence

The sequence to be set.

headerstr, optional

The header for the sequence. Default is 'sequence'.

as_rnabool, optional

If set to true, 'T' will be replaced by 'U', if a NucleotideSequence was given.

Raises
ValueError

If the sequence’s alphabet uses symbols other than single characters.