biotite.sequence.align.CigarOp¶
- class biotite.sequence.align.CigarOp(value)[source]¶
Bases:
IntEnumAn enum for the different CIGAR operations.
- MATCH = 0¶
- INSERTION = 1¶
- DELETION = 2¶
- INTRON = 3¶
- SOFT_CLIP = 4¶
- HARD_CLIP = 5¶
- PADDING = 6¶
- EQUAL = 7¶
- DIFFERENT = 8¶
- BACK = 9¶
- static from_cigar_symbol(symbol)¶
Get the enum value from the CIGAR symbol.
- Parameters
- symbolstr
The CIGAR symbol.
- Returns
- opCigarOp
The enum value.
- to_cigar_symbol()¶
