biotite.sequence.io

A subpackage for reading and writing sequence related data.

Content

load_sequence	Load a sequence from a sequence file without the need to manually instantiate a File object.
load_sequences	Load multiple sequences from a sequence file without the need to manually instantiate a File object.
save_sequence	Save a sequence into a sequence file without the need to manually instantiate a File object.
save_sequences	Save multiple sequences into a sequence file without the need to manually instantiate a File object.

Subpackages

biotite.sequence.io.genbank	This subpackage is used for reading/writing information (especially sequence features) from/to files in the GenBank and GenPept format.
biotite.sequence.io.fastq	This subpackage is used for reading and writing sequencing data using the popular FASTQ format.
biotite.sequence.io.gff	This subpackage is used for reading and writing sequence features in the Generic Feature Format 3 (GFF3).
biotite.sequence.io.fasta	This subpackage is used for reading and writing sequence objects using the popular FASTA format.