biotite.sequence.io.genbank.get_sequence¶
- biotite.sequence.io.genbank.get_sequence(gb_file, format='gb')[source]¶
Get the sequence from the ORIGIN field of a GenBank file.
- Parameters
- gb_fileGenBankFile
The GenBank file to read the ORIGIN field from.
- format{‘gb’, ‘gp’}
Indicates whether the file is a GenBank or a GenPept file. Depending on this parameter a
NucleotideSequence
or aProteinSequence
is returned.
- Returns
- sequenceNucleotideSequence or ProteinSequence
The reference sequence in the file.
Gallery¶
Finding homologs of a gene in a genome
Finding homologs of a gene in a genome
Hydropathy and conservation of HCN channels
Hydropathy and conservation of HCN channels