biotite.structure.io.write_structure_to_ctab¶
- biotite.structure.io.write_structure_to_ctab(atoms, default_bond_type=8)[source]¶
Convert an
AtomArrayinto a MDL connection table (Ctab). 1- Parameters
- atomsAtomArray
The array must have an associated
BondList.
- Returns
- ctab_lineslines of str
The lines containing the ctab. The lines begin with the counts line and end with the M END .line
- default_bond_typeint
Bond type fallback in the Bond block if a bond has no bond_type defined in atoms array.
References
- 1
A. Dalby, J. G. Nourse, W. D. Hounshell, A. K. I. Gushurst, D. L. Grier, B. A. Leland, J. Laufer, “Description of several chemical structure file formats used by computer programs developed at Molecular Design Limited,” Journal of Chemical Information and Computer Sciences, vol. 32, pp. 244–255, May 1992. doi: 10.1021/ci00007a012
