# biotite.sequence.phylo¶

## Data structures¶

 Tree A Tree represents a rooted tree (e.g. TreeNode TreeNode objects are part of a rooted tree (e.g.

## Clustering algorithms¶

 upgma Perform hierarchical clustering using the unweighted pair group method with arithmetic mean (UPGMA). neighbor_joining Perform hierarchical clustering using the neighbor joining algorithm [1,2]_.

## Miscellaneous¶

 TreeError An exception that occurs in context of tree topology. as_binary Convert a tree into a binary tree.