biotite ======= .. currentmodule:: biotite .. automodule:: biotite .. currentmodule:: biotite File classes ------------ .. autosummary:: :nosignatures: :toctree: File TextFile Temporary files --------------- .. autosummary:: :nosignatures: :toctree: temp_dir temp_file Visualization utilities ----------------------- .. autosummary:: :nosignatures: :toctree: set_font_size_in_coord AdaptiveFancyArrow Miscellaneous ------------- .. autosummary:: :nosignatures: :toctree: Copyable InvalidFileError Subpackages ----------- .. autosummary:: biotite.structure biotite.structure.graphics biotite.structure.info biotite.structure.io biotite.structure.io.xtc biotite.structure.io.pdb biotite.structure.io.mmtf biotite.structure.io.mol biotite.structure.io.trr biotite.structure.io.pdbqt biotite.structure.io.gro biotite.structure.io.tng biotite.structure.io.pdbx biotite.structure.io.dcd biotite.structure.io.netcdf biotite.structure.io.npz biotite.database biotite.database.entrez biotite.database.uniprot biotite.database.rcsb biotite.database.pubchem biotite.application biotite.application.dssp biotite.application.muscle biotite.application.tantan biotite.application.viennarna biotite.application.autodock biotite.application.clustalo biotite.application.sra biotite.application.mafft biotite.application.blast biotite.sequence biotite.sequence.phylo biotite.sequence.align biotite.sequence.graphics biotite.sequence.io biotite.sequence.io.fasta biotite.sequence.io.genbank biotite.sequence.io.gff biotite.sequence.io.fastq